LCOV - code coverage report
Current view: top level - EMCAL/EMCALrec - AliEMCALClusterizerNxN.cxx (source / functions) Hit Total Coverage
Test: coverage.info Lines: 1 148 0.7 %
Date: 2016-06-14 17:26:59 Functions: 1 13 7.7 %

          Line data    Source code
       1             : /**************************************************************************
       2             :  * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
       3             :  *                                                                        *
       4             :  * Author: The ALICE Off-line Project.                                    *
       5             :  * Contributors are mentioned in the code where appropriate.              *
       6             :  *                                                                        *
       7             :  * Permission to use, copy, modify and distribute this software and its   *
       8             :  * documentation strictly for non-commercial purposes is hereby granted   *
       9             :  * without fee, provided that the above copyright notice appears in all   *
      10             :  * copies and that both the copyright notice and this permission notice   *
      11             :  * appear in the supporting documentation. The authors make no claims     *
      12             :  * about the suitability of this software for any purpose. It is          *
      13             :  * provided "as is" without express or implied warranty.                  *
      14             :  **************************************************************************/
      15             : 
      16             : // This class derives from AliEMCALClustrerizer but also keeps the API of AliEMCALClusterizerv1
      17             : // Algorithm:
      18             : // 1. peek the most energetic cell
      19             : // 2. assign it as a center of the cluster and add cells surrounding it: 3x3, 5x5...
      20             : // 3. remove the cells contributing to the cluster
      21             : // 4. start from 1 for the remaining clusters
      22             : // 5. cluster splitting (not implemented yet) - use the shape analysis to resolve the energy sharing
      23             : // - for high energy clusters check the surrounding of the 3x3 clusters for extra energy 
      24             : // (merge 3x3 clusters and resolve the internal energy sharing - case for 2 clusters merged)
      25             : // Use Case:
      26             : //  root [0] AliEMCALClusterizerNxN * cl = new AliEMCALClusterizerNxN("galice.root")  
      27             : //  Warning in <TDatabasePDG::TDatabasePDG>: object already instantiated
      28             : //               //reads gAlice from header file "..."                      
      29             : //  root [1] cl->ExecuteTask()  
      30             : //               //finds RecPoints in all events stored in galice.root
      31             : //  root [2] cl->SetDigitsBranch("digits2") 
      32             : //               //sets another title for Digitis (input) branch
      33             : //  root [3] cl->SetRecPointsBranch("recp2")  
      34             : //               //sets another title four output branches
      35             : //  root [4] cl->SetTowerLocalMaxCut(0.03)  
      36             : //               //set clusterization parameters
      37             : //  root [5] cl->ExecuteTask("deb all time")  
      38             : //               //once more finds RecPoints options are 
      39             : //               // deb - print number of found rec points
      40             : //               // deb all - print number of found RecPoints and some their characteristics 
      41             : //               // time - print benchmarking results
      42             : 
      43             : // --- ROOT system ---
      44             : #include <TMath.h> 
      45             : #include <TMinuit.h>
      46             : #include <TTree.h> 
      47             : #include <TBenchmark.h>
      48             : #include <TBrowser.h>
      49             : #include <TROOT.h>
      50             : #include <TClonesArray.h>
      51             : 
      52             : // --- Standard library ---
      53             : #include <cassert>
      54             : 
      55             : // --- AliRoot header files ---
      56             : #include "AliLog.h"
      57             : #include "AliEMCALClusterizerNxN.h"
      58             : #include "AliEMCALRecPoint.h"
      59             : #include "AliEMCALDigit.h"
      60             : #include "AliEMCALGeometry.h"
      61             : #include "AliCaloCalibPedestal.h"
      62             : #include "AliEMCALCalibData.h"
      63             : #include "AliEMCALCalibTime.h"
      64             : #include "AliESDCaloCluster.h"
      65             : #include "AliEMCALUnfolding.h"
      66             : 
      67          42 : ClassImp(AliEMCALClusterizerNxN)
      68             : 
      69             : //____________________________________________________________________________
      70             : AliEMCALClusterizerNxN::AliEMCALClusterizerNxN()
      71           0 :   : AliEMCALClusterizer(), fNRowDiff(1), fNColDiff(1), fEnergyGrad(0)
      72           0 : {
      73             :   // ctor with the indication of the file where header Tree and digits Tree are stored
      74           0 : }
      75             : 
      76             : //____________________________________________________________________________
      77             : AliEMCALClusterizerNxN::AliEMCALClusterizerNxN(AliEMCALGeometry* geometry)
      78           0 :   : AliEMCALClusterizer(geometry), fNRowDiff(1), fNColDiff(1), fEnergyGrad(0)
      79           0 : {
      80             :   // ctor with the indication of the file where header Tree and digits Tree are stored
      81             :   // use this contructor to avoid usage of Init() which uses runloader
      82             :   // change needed by HLT - MP
      83           0 : }
      84             : 
      85             : //____________________________________________________________________________
      86             : AliEMCALClusterizerNxN::AliEMCALClusterizerNxN(AliEMCALGeometry* geometry, 
      87             :                                                AliEMCALCalibData * calib, 
      88             :                                                AliEMCALCalibTime * calibt, 
      89             :                                                AliCaloCalibPedestal * caloped)
      90           0 : : AliEMCALClusterizer(geometry, calib, calibt, caloped), 
      91           0 : fNRowDiff(1), fNColDiff(1), fEnergyGrad(0)
      92           0 : {
      93             :   // ctor, geometry and calibration are initialized elsewhere.
      94           0 : }
      95             : 
      96             : //____________________________________________________________________________
      97             : AliEMCALClusterizerNxN::~AliEMCALClusterizerNxN()
      98           0 : {
      99             :   // dtor
     100           0 : }
     101             : 
     102             : //____________________________________________________________________________
     103             : void AliEMCALClusterizerNxN::Digits2Clusters(Option_t * option)
     104             : {
     105             :   // Steering method to perform clusterization for the current event 
     106             :   // in AliEMCALLoader
     107             :   
     108           0 :   if (strstr(option,"tim"))
     109           0 :     gBenchmark->Start("EMCALClusterizer"); 
     110             :   
     111           0 :   if (strstr(option,"print"))
     112           0 :     Print(""); 
     113             :   
     114             :   //Get calibration parameters from file or digitizer default values.
     115           0 :   GetCalibrationParameters();
     116             :   
     117             :   //Get dead channel map from file or digitizer default values.
     118           0 :   GetCaloCalibPedestal();
     119             :         
     120           0 :   MakeClusters();  //only the real clusters
     121             :   
     122           0 :   if (fToUnfold) {
     123           0 :     fClusterUnfolding->SetInput(fNumberOfECAClusters,fRecPoints,fDigitsArr);
     124           0 :     fClusterUnfolding->MakeUnfolding();
     125           0 :   }
     126             :   
     127             :   //Evaluate position, dispersion and other RecPoint properties for EC section 
     128           0 :   for (Int_t index = 0; index < fRecPoints->GetEntries(); index++) { 
     129           0 :     AliEMCALRecPoint * rp = dynamic_cast<AliEMCALRecPoint *>(fRecPoints->At(index));
     130           0 :     if (rp) {
     131           0 :       rp->EvalAll(fECAW0,fDigitsArr,fJustClusters);
     132           0 :       AliDebug(5, Form("MAX INDEX %d ", rp->GetMaximalEnergyIndex()));
     133             :       //For each rec.point set the distance to the nearest bad crystal
     134           0 :       if (fCaloPed)
     135           0 :         rp->EvalDistanceToBadChannels(fCaloPed);
     136             :     }
     137             :   }
     138             :   
     139           0 :   fRecPoints->Sort();
     140             :   
     141           0 :   for (Int_t index = 0; index < fRecPoints->GetEntries(); index++) {
     142           0 :     AliEMCALRecPoint *rp = dynamic_cast<AliEMCALRecPoint *>(fRecPoints->At(index));
     143           0 :     if (rp) {
     144           0 :       rp->SetIndexInList(index);
     145           0 :     }
     146           0 :     else AliFatal("RecPoint NULL!!");
     147             :   }
     148             :   
     149           0 :   if (fTreeR)
     150           0 :     fTreeR->Fill();
     151             :   
     152           0 :   if (strstr(option,"deb") || strstr(option,"all"))  
     153           0 :     PrintRecPoints(option);
     154             :   
     155           0 :   AliDebug(1,Form("EMCAL Clusterizer found %d Rec Points",fRecPoints->GetEntriesFast()));
     156             :   
     157           0 :   if (strstr(option,"tim")) {
     158           0 :     gBenchmark->Stop("EMCALClusterizer");
     159           0 :     printf("Exec took %f seconds for Clusterizing", 
     160           0 :            gBenchmark->GetCpuTime("EMCALClusterizer"));
     161           0 :   }    
     162           0 : }
     163             : 
     164             : //____________________________________________________________________________
     165             : Int_t AliEMCALClusterizerNxN::AreNeighbours(AliEMCALDigit * d1, AliEMCALDigit * d2, Bool_t & shared) const
     166             : {
     167             :   // Gives the neighbourness of two digits = 0 are not neighbour ; continue searching 
     168             :   //                                       = 1 are neighbour
     169             :   //                                       = 2 is in different SM; continue searching 
     170             :   // In case it is in different SM, but same phi rack, check if neigbours at eta=0
     171             :   // neighbours are defined as digits having at least a common side 
     172             :   // The order of d1 and d2 is important: first (d1) should be a digit already in a cluster 
     173             :   //                                      which is compared to a digit (d2)  not yet in a cluster  
     174             :   
     175           0 :   if (fEnergyGrad) { //false by default
     176           0 :     if (d2->GetCalibAmp()>d1->GetCalibAmp())
     177           0 :       return 3; // energy of neighboring cell should be smaller in order to become a neighbor
     178             :   }
     179             : 
     180           0 :   Int_t nSupMod1=0, nModule1=0, nIphi1=0, nIeta1=0, iphi1=0, ieta1=0;
     181           0 :   Int_t nSupMod2=0, nModule2=0, nIphi2=0, nIeta2=0, iphi2=0, ieta2=0;
     182             :   Int_t rowdiff=0, coldiff=0;
     183             :   
     184           0 :   shared = kFALSE;
     185             :   
     186           0 :   fGeom->GetCellIndex(d1->GetId(), nSupMod1,nModule1,nIphi1,nIeta1);
     187           0 :   fGeom->GetCellIndex(d2->GetId(), nSupMod2,nModule2,nIphi2,nIeta2);
     188           0 :   fGeom->GetCellPhiEtaIndexInSModule(nSupMod1,nModule1,nIphi1,nIeta1, iphi1,ieta1);
     189           0 :   fGeom->GetCellPhiEtaIndexInSModule(nSupMod2,nModule2,nIphi2,nIeta2, iphi2,ieta2);
     190             :   
     191             :   //If different SM, check if they are in the same phi, then consider cells close to eta=0 as neighbours; May 2010
     192           0 :   if (nSupMod1 != nSupMod2 ) 
     193             :     {
     194             :       //Check if the 2 SM are in the same PHI position (0,1), (2,3), ...
     195           0 :       Float_t smPhi1 = fGeom->GetEMCGeometry()->GetPhiCenterOfSM(nSupMod1);
     196           0 :       Float_t smPhi2 = fGeom->GetEMCGeometry()->GetPhiCenterOfSM(nSupMod2);
     197             :       
     198           0 :       if (!TMath::AreEqualAbs(smPhi1, smPhi2, 1e-3)) return 2; //Not phi rack equal, not neighbours
     199             :       
     200             :       // In case of a shared cluster, index of SM in C side, columns start at 48 and ends at 48*2
     201             :       // C Side impair SM, nSupMod%2=1; A side pair SM nSupMod%2=0
     202           0 :       if (nSupMod1%2) ieta1+=AliEMCALGeoParams::fgkEMCALCols;
     203           0 :       else           ieta2+=AliEMCALGeoParams::fgkEMCALCols;
     204             :       
     205           0 :       shared = kTRUE; // maybe a shared cluster, we know this later, set it for the moment.
     206             :       
     207           0 :     }//Different SM, same phi
     208             :   
     209           0 :   rowdiff = TMath::Abs(iphi1 - iphi2);  
     210           0 :   coldiff = TMath::Abs(ieta1 - ieta2);  
     211             :   
     212             :   // neighbours +-1 in col and row
     213           0 :   if ( TMath::Abs(coldiff) <= fNColDiff && TMath::Abs(rowdiff) <= fNRowDiff)
     214             :     {
     215             :       
     216           0 :       AliDebug(9, Form("AliEMCALClusterizerNxN::AreNeighbours(): id1=%d, (row %d, col %d) ; id2=%d, (row %d, col %d), shared %d \n",
     217             :                        d1->GetId(), iphi1,ieta1, d2->GetId(), iphi2,ieta2, shared));
     218             :       
     219           0 :       return 1;
     220             :     }//Neighbours
     221             :   else 
     222             :     {
     223           0 :       AliDebug(9, Form("NOT AliEMCALClusterizerNxN::AreNeighbours(): id1=%d, (row %d, col %d) ; id2=%d, (row %d, col %d), shared %d \n",
     224             :                        d1->GetId(), iphi1,ieta1, d2->GetId(), iphi2,ieta2, shared));
     225           0 :       shared = kFALSE;
     226           0 :       return 2; 
     227             :     }//Not neighbours
     228           0 : }
     229             : 
     230             : //____________________________________________________________________________
     231             : void AliEMCALClusterizerNxN::MakeClusters()
     232             : {
     233             :   // Make clusters
     234             :   
     235           0 :   if (fGeom==0) 
     236           0 :     AliFatal("Did not get geometry from EMCALLoader");
     237             :   
     238           0 :   fNumberOfECAClusters = 0;
     239           0 :   fRecPoints->Delete();
     240             :   
     241             :   // Set up TObjArray with pointers to digits to work on, calibrate digits 
     242           0 :   TObjArray digitsC;
     243           0 :   TIter nextdigit(fDigitsArr);
     244             :   AliEMCALDigit *digit = 0;
     245           0 :   while ( (digit = static_cast<AliEMCALDigit*>(nextdigit())) ) {
     246           0 :     Float_t dEnergyCalibrated = digit->GetAmplitude();
     247           0 :     Float_t time              = digit->GetTime();
     248           0 :     Calibrate(dEnergyCalibrated,time ,digit->GetId());
     249           0 :     digit->SetCalibAmp(dEnergyCalibrated);
     250           0 :     digit->SetTime(time);    
     251           0 :     digitsC.AddLast(digit);
     252           0 :   }
     253             :   
     254           0 :   TIter nextdigitC(&digitsC);
     255             :   
     256           0 :   AliDebug(1,Form("MakeClusters: Number of digits %d  -> (e %f)\n",
     257             :                   fDigitsArr->GetEntries(),fMinECut));
     258             :   
     259             :   Bool_t bDone = kFALSE;
     260           0 :   while ( bDone != kTRUE )
     261             :   {
     262             :     //first sort the digits:
     263             :     Int_t iMaxEnergyDigit = -1;
     264             :     Float_t dMaxEnergyDigit = -1;
     265             :     AliEMCALDigit *pMaxEnergyDigit = 0;
     266           0 :     nextdigitC.Reset();
     267           0 :     while ( (digit = static_cast<AliEMCALDigit *>(nextdigitC())) ) 
     268             :     { // scan over the list of digitsC
     269           0 :       Float_t dEnergyCalibrated = digit->GetCalibAmp();
     270           0 :       Float_t time              = digit->GetTime();
     271           0 :       if (fGeom->CheckAbsCellId(digit->GetId()) &&
     272           0 :           dEnergyCalibrated > fMinECut          &&
     273           0 :           time              < fTimeMax          &&
     274           0 :           time              > fTimeMin             ) // no threshold by default!
     275             :       {                                              // needs to be set in OCDB!
     276           0 :         if (dEnergyCalibrated > dMaxEnergyDigit) 
     277             :         {
     278             :           dMaxEnergyDigit = dEnergyCalibrated;
     279           0 :           iMaxEnergyDigit = digit->GetId();
     280             :           pMaxEnergyDigit = digit;
     281           0 :         }
     282             :       }
     283             :     }
     284           0 :     if (iMaxEnergyDigit < 0 || digitsC.GetEntries() <= 0) 
     285             :     {
     286             :       bDone = kTRUE;
     287           0 :       continue;
     288             :     }
     289             :     
     290           0 :     AliDebug (2, Form("Max digit found: %1.5f AbsId: %d", dMaxEnergyDigit, iMaxEnergyDigit));
     291             :     
     292             :     // keep the candidate digits in a list
     293           0 :     TList clusterDigitList;
     294           0 :     clusterDigitList.SetOwner(kFALSE);
     295           0 :     clusterDigitList.AddLast(pMaxEnergyDigit);   
     296             :     
     297           0 :     Double_t clusterCandidateEnergy = dMaxEnergyDigit;
     298             :     
     299             :     // now loop over the rest of the digits and cluster into NxN cluster 
     300             :     // we do not actually cluster yet: we keep them in the list clusterDigitList
     301           0 :     nextdigitC.Reset();
     302           0 :     while ( (digit = static_cast<AliEMCALDigit *>(nextdigitC())) ) 
     303             :     { // scan over the list of digitsC
     304           0 :       if (digit == pMaxEnergyDigit) continue;
     305           0 :       Float_t dEnergyCalibrated = digit->GetCalibAmp();
     306           0 :       AliDebug(5, Form("-> Digit ENERGY: %1.5f", dEnergyCalibrated));
     307           0 :       if (fGeom->CheckAbsCellId(digit->GetId()) && dEnergyCalibrated > 0.0  )
     308             :       {
     309           0 :         Float_t time = pMaxEnergyDigit->GetTime(); //Time or TimeR?
     310           0 :         if (TMath::Abs(time - digit->GetTime()) > fTimeCut ) continue; //Time or TimeR?
     311           0 :         Bool_t shared = kFALSE; //cluster shared by 2 SuperModules?
     312           0 :         if (AreNeighbours(pMaxEnergyDigit, digit, shared) == 1) // call (digit,digitN) in THAT order !!!!! 
     313             :         {      
     314           0 :           clusterDigitList.AddLast(digit);
     315           0 :           clusterCandidateEnergy += dEnergyCalibrated;
     316           0 :         }
     317           0 :       }
     318           0 :     }// loop over the next digits
     319             :     
     320             :     // start a cluster here only if a cluster energy is larger than clustering threshold
     321           0 :     AliDebug(5, Form("Clusterization threshold is %f MeV", fECAClusteringThreshold));
     322           0 :     if (clusterCandidateEnergy > fECAClusteringThreshold)
     323             :     {
     324           0 :       if (fNumberOfECAClusters >= fRecPoints->GetSize()) 
     325           0 :         fRecPoints->Expand(2*fNumberOfECAClusters+1);
     326             :       
     327           0 :       (*fRecPoints)[fNumberOfECAClusters] = new AliEMCALRecPoint("") ;
     328           0 :       AliEMCALRecPoint *recPoint = dynamic_cast<AliEMCALRecPoint *>( fRecPoints->At(fNumberOfECAClusters) ) ;
     329             :       // AliEMCALRecPoint *recPoint = new  AliEMCALRecPoint(""); 
     330             :       // fRecPoints->AddAt(recPoint, fNumberOfECAClusters);
     331             :       // recPoint = static_cast<AliEMCALRecPoint *>(fRecPoints->At(fNumberOfECAClusters)); 
     332           0 :       if (recPoint) {
     333           0 :         fNumberOfECAClusters++;       
     334           0 :         recPoint->SetClusterType(AliVCluster::kEMCALClusterv1);
     335             :         
     336           0 :         AliDebug(9, Form("Number of cells per cluster (max is 9!): %d", clusterDigitList.GetEntries()));
     337           0 :         for (Int_t idig = 0; idig < clusterDigitList.GetEntries(); idig++)
     338             :         {
     339           0 :           digit = (AliEMCALDigit*)clusterDigitList.At(idig);
     340           0 :           AliDebug(5, Form(" Adding digit %d", digit->GetId()));
     341             :           // note: this way the sharing info is lost!
     342           0 :           recPoint->AddDigit(*digit, digit->GetCalibAmp(), kFALSE); //Time or TimeR?
     343           0 :           digitsC.Remove(digit);                  
     344             :         }
     345           0 :       }// recpoint
     346           0 :     }
     347             :     else
     348             :     {
     349             :       // we do not want to start clustering in the same spot!
     350             :       // but in this case we may NOT reuse this seed for another cluster!
     351             :       // need a better bookeeping?
     352           0 :       digitsC.Remove(pMaxEnergyDigit);
     353             :     }
     354             :     
     355           0 :     AliDebug (2, Form("Number of digits left: %d", digitsC.GetEntries()));      
     356           0 :   } // while ! done 
     357             :   
     358           0 :   AliDebug(1,Form("total no of clusters %d from %d digits",fNumberOfECAClusters,fDigitsArr->GetEntriesFast())); 
     359           0 : }

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